PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
CARCA-F
Gene name
A fragment of the mini chromosome maintenance complex 7 gene (Mcm7)
Primer sequence (5'-3')
CARCACAARAAGGCNTAYAGC
Direction
F
Category
specific primer
Target
fungi
Paired primer
M4565-R M456-5R-Cla
Reference
van der Linde EJ, Píchová K, Pažoutová S, et al. (2022) Pre-invasion assessment on African invasive grasses revealed five new species of ergot fungi, Claviceps section Pusillae. Fungal Biology 126: 752–763.
Literature
Tanaka E, Tanada K, Hosoe T, Shrestha B, Kolařík M, Liu M (2023) In search of lost ergots: phylogenetic re-evaluation of Claviceps species in Japan and their biogeographic patterns revealed. Studies in Mycology 106: 1–39.
Reference Strain
Claviceps agropyriMAFF 247732
Claviceps phragmitisMAFF 247550