PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
TEF-1567R-Cla
Gene name
translation elongation factor 1 alpha (TEF-1α)
Primer sequence (5'-3')
GTTCCRATRCCDCCRATCTTG
Direction
R
Category
specific primer
Target
fungi
Paired primer
TEF-1577F-Cla
Reference
Tanaka E, Shrestha B, Shivas RG (2020) Commelinaceomyces, gen. nov., for four clavicipitaceous species misplaced in Ustilago that infect Commelinaceae. Mycologia 112: 649–660.
Literature
Tanaka E, Tanada K, Hosoe T, Shrestha B, Kolařík M, Liu M (2023) In search of lost ergots: phylogenetic re-evaluation of Claviceps species in Japan and their biogeographic patterns revealed. Studies in Mycology 106: 1–39.
Reference Strain
Claviceps kawataniiMAFF 247557
Claviceps purpureaMAFF 247544