PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
LR5+
Gene name
The internal transcribed spacer and the large subunit regions (ITS-LSU)
Primer sequence (5'-3')
ACTGCTATCCTGAGGGAAACTTCG
Category
specific primer
Target
fungi
Reference
Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238–4246.
Literature
Tanaka E, Tanada K, Hosoe T, Shrestha B, Kolařík M, Liu M (2023) In search of lost ergots: phylogenetic re-evaluation of Claviceps species in Japan and their biogeographic patterns revealed. Studies in Mycology 106: 1–39.
Reference Strain
Claviceps agropyriMAFF 247547
Claviceps phragmitisMAFF 247549