PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
LR2SM
Gene name
The internal transcribed spacer and the large subunit regions (ITS-LSU)
Primer sequence (5'-3')
CCTCTTTTCAAAGTGCTTTTC
Direction
F
Category
specific primer
Target
fungi
Paired primer
LR2RSM
Reference
Sullivan RF, Bills GF, Hywel-Jones NL, White JF Jr. (2000) Hyperdermium: a new clavicipitalean genus for some tropical epibionts of dicotyledonous plants. Mycologia 92: 908–918.
Literature
Tanaka E, Tanada K, Hosoe T, Shrestha B, Kolařík M, Liu M (2023) In search of lost ergots: phylogenetic re-evaluation of Claviceps species in Japan and their biogeographic patterns revealed. Studies in Mycology 106: 1–39.
Reference Strain
Claviceps africanaMAFF 247564
Claviceps paspali MAFF 247572