PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
Mat1M72F
Gene name
The 3f end of apn2 and the 5f end of the mating type gene Mat1-2 (Mat1/Apn2)
Primer sequence (5'-3')
ACGGCAAACGGCTCAGGGAGTG
Direction
F
Category
specific primer
Target
fungi
Paired primer
Mat1M72R
Reference
Crouch, J.A., Tredway, L.P., Clarke, B.B., Hillman, B.I. (2009) Phylogenetic and population genetic divergence correspond with habitat for the pathogen Colletotrichum cereale and allied taxa across diverse grass communities. Molecular Ecology 18: 123–135.
Literature
Liu, F., Ma, Z.Y., Hou, L.W., Diao, Y.Z., Wu, W.P., Damm, U., Song, S. and Cai, L. (2022) Updating species diversity of Colletotrichum, with a phylogenomic overview. Studies in Mycology 101: 1–56.
Reference Strain
Colletotrichum hanauiMAFF 305404
Colletotrichum nicholsoniiMAFF 511115
Colletotrichum paspaliMAFF 305403
Colletotrichum zoysiaeMAFF 238573, MAFF 238574, MAFF 238576
Fusarium moriMAFF 238538, MAFF 238539
Fusarium oligoseptatumMAFF 246283