PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
Fon-F
Gene name
ITS1-5.8S-ITS2 rRNA gene (ITS)
Primer sequence (5'-3')
TAATGCGGGTGTTGCCTCTG
Direction
F
Category
specific primer
Target
Fonsecaea
Reference
Abliz P, Fukushima K, Takizawa K, Nieda N, Miyaji M and Nishimura K (2003) Rapid identification of the genus fonsecaea by PCR with specific oligonucleotide primers. Journal of Clinical Microbiology 41(2): 873-876.
Reference Strain
Alternaria alternataIFM 41348
Aureobasidium pullulansIFM 4802
Candida albicansIFM 40214
Candida dubliniensisIFM 48313
Candida glabrataIFM 46888
Candida parapsilosisIFM 46863
Candida tropicalisIFM 46816
Cladophialophora bantianaIFM 46165
Cladophialophora carrioniiIFM 4805, IFM 4810, IFM 4812, IFM 41444, IFM 41446, IFM 41641
Cladophialophora devriesiiIFM 51369
Cladophialophora minouraeIFM 4841
Cladosporium cladosporioidesIFM 41447, IFO 6368
Cladosporium colocasiaeIFM 51371
Cladosporium coralloidesIFM 41451, IFO 6536
Cladosporium elatumIFM 41452, IFO 6372
Cladosporium fulvumIFM 40703
Cladosporium herbarumIFM 41454
Cladosporium minusculumIFM 51370
Cladosporium resinae f. sp. avellaneumIFM 41456, IFO 6367
Cladosporium sphaerospermumIFM 41453, IFO 4458
Cladosporium variabileIFM 41458, IFO 6378
Cryptococcus neoformans var. neoformansIFM 40216
Exophiala alcalophilaIFM 41654
Exophiala dermatitidisIFM 41479, IFM 41818, IFM 41828, IFM 45986
Exophiala jeanselmeiIFM 41691, IFM 45989
Exophiala moniliaeIFM 41500
Exophiala spiniferaIFM 4883
Fonsecaea compactaIFM 4886, IFM 41704, IFM 41931
Fonsecaea pedrosoiIFM 4856, IFM 4887, IFM 4889, IFM 4890, IFM 4892, IFM 4894, IFM 4896, IFM 4898, IFM 4914, IFM 4915
Hormoconis resinaeIFM 51372, IFO 8588
Hortaea werneckiiIFM 51373
Lecythophora ho¡manniiIFM 4922
Lecythophora mutabilisIFM 4923
Malassezia furfurIFM 48585
Phaeoacremonium parasiticumIFM 4924
Phialophora albaIFM 51363, IFO 31973
Phialophora americanaIFM 51361
Phialophora atrovirensIFM 51364, IFO 6793
Phialophora bubakiiIFM 51365, IFO 6794
Phialophora cinerescensIFM 51366, IFO 6849
Phialophora fastigiataIFM 41577, IFO 6856
Phialophora heteromorphaIFM 41578, IFO 6878
Phialophora lagerbergiiIFM 51367, IFO 8576
Phialophora meliniiIFM 51362
Phialophora oxysporaIFM 51368
Phialophora repensIFM 4925
Phialophora richardsiaeIFM 4926
Phialophora verrucosaIFM 4928, IFM 41710, IFM 41871, IFM 41873, IFM 41879
Rhinocladiella aquaspersaIFM 4930
Rhinocladiella atrovirensIFM 4931
Trichosporon asahii var. asahiiIFM 48429