PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
Apn1W1F
Gene name
Mat1 and the adjacent DNA lyase gene (apn2)
Primer sequence (5'-3')
ATGGAGCACAAAAACGAACA
Direction
F
Category
specific primer
Target
fungi
Paired primer
Apn1W1R
Reference
Crouch, J.A., Tredway, L.P., Clarke, B.B., Hillman, B.I. (2009) Phylogenetic and population genetic divergence correspond with habitat for the pathogen Colletotrichum cereale and allied taxa across diverse grass communities. Molecular Ecology 18: 123–135.
Literature
Liu, F., Ma, Z.Y., Hou, L.W., Diao, Y.Z., Wu, W.P., Damm, U., Song, S. and Cai, L. (2022) Updating species diversity of Colletotrichum, with a phylogenomic overview. Studies in Mycology 101: 1–56.
Reference Strain
Colletotrichum eleusinesMAFF 511155
Colletotrichum hanauiMAFF 305404
Colletotrichum miscanthiMAFF 510857
Colletotrichum nicholsoniiMAFF 511115
Colletotrichum paspaliMAFF 305403
Colletotrichum zoysiaeMAFF 238573, MAFF 238574, MAFF 238576