PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
ToMVcpR
Gene name
viral capsid/coat protein gene
Primer sequence (5'-3')
AAAAACACTGTACGTTATC
Direction
R
Category
specific primer
Target
Virus
Paired primer
ToMVcpF
Reference
Uehara-Ichiki, T., Fuji, S., Sugimoto, R., Ohashi, M., Yabunaka, K., Kitaya, M., Yamashita, K., Hanada, K. and Aoki, T. (2016) Detection and application of viral capsid/coat protein genes of plant viruses preserved in the NARO Genebank (MAFF). Microbial Resources and Systematics 32: 39-47.
Reference Strain
Tobamovirus Tomato mosaic virusMAFF 104034, MAFF 260001, MAFF 260002, MAFF 260004, MAFF 260005, MAFF 260006, MAFF 260007, MAFF 260008, MAFF 260009, MAFF 260010, MAFF 260011, MAFF 260012, MAFF 260013, MAFF 260017, MAFF 260022, MAFF 260023, MAFF 260051, MAFF 260052, MAFF 260062