PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
Gene name
intergenic spacer region of rRNA gene (IGS)
Primer sequence (5'-3')
Mulè G, Susca A, Stea G and Moretti A (2004) A species-specific PCR assay based on the calmodulin partial gene for identification of Fusarium verticillioides, F. proliferatum and F. subglutinans. European Journal of Plant Pathology 110: 495-502.
Wang C, Lin Y, Lin Y and Chung W (2013) Modified primers for the identification of nonpathogenic Fusarium oxysporum isolates that have biological vontrol potential against Fusarium wilt of cucumber in Taiwan. PLoS One 8: e65093.
Kawabe M, Kobayashi Y, Okada G, Yamaguchi I, Teraoka T and Arie T (2005) Three evolutionary lineages of tomato wilt pathogen, Fusarium oxysporum f. sp. lycopersici, based on sequences of IGS, MAT1, and pg1, are each composed of isolates of a single mating type and a single or closely related vegetative compatibility group. Journal of General Plant Pathology 71: 263-272.
Reference Strain
Fusarium oxysporum f. sp. batatasMAFF 103070
Fusarium oxysporum f. sp. lycopersiciMAFF 103043, MAFF 305121, MAFF 727501, MAFF 744006
Fusarium oxysporum f. sp. lycopersici race 1MAFF 103036
Fusarium oxysporum f. sp. lycopersici race 2MAFF 103038
Fusarium oxysporum f. sp. melongenaeMAFF 103051
Fusarium oxysporum f. sp. niveumMAFF 305608
Fusarium oxysporum f. sp. radicis-lycopersiciMAFF 103044, MAFF 103047