PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
Gene name
rRNA intergenic spacer region (IGS)
Primer sequence (5'-3')
Edel V, C Steinberg, I Avelange, G Laguerre and C Alabouvette (1995) Comparison of three molecular methods for the characterization of Fusarium oxysporum strains. Phytopathology 85: 579-585.
Gerda Fourie, ET Steenkamp, TR Gordon and A Viljoen (2009) Evolutionary relationships among the Fusarium oxysporum f. sp. cubense vegetative compatibility groups. Applied and Environmental Microbiology 75: 4770-4781.
Michael J Southwood, Altus Viljoen, Lizel Mostert, Lindy J Rose and Adéle McLeod (2012) Phylogenetic and biological characterization of Fusarium oxysporum isolates associated with onion in south Africa. Plant Disease 96: 1250-1261.
Reference Strain
Colletotrichum asianumMAFF 306627
Colletotrichum boninenseMAFF 305972
Colletotrichum horiiMAFF 306492, NBRC 7478
Colletotrichum tropicaleMAFF 239933