PriMicro Database

For classification, identification and molecular phylogenetic analyses of microbes

Primer Detail

Primer name
Gene name
RNA polymerase II (RPB2)
Primer sequence (5'-3')
Liu YJ, Whelen S, Hall BD (1999) Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Molecular Biology and Evolution 16: 1799-1808.
Valérie Reeb, François Lutzoni and Claude Roux (2004) Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory. Molecular Phylogenetics and Evolution 32: 1036-1060.
Hong Sae-Yeon, Kang Mi-Ran, Cho Eun-Ji, Kim Hee-Kyoung and Yun Sung-Hwan (2010) Specific PCR detection of four quarantine Fusarium species in Korea. The plant pathology journal 26: 409-416.
Kerry O’Donnell, Deanna A Sutton, Michael G Rinaldi, Brice AJ Sarver, S Arunmozhi Balajee, Hans-Josef Schroers, Richard C Summerbell, Vincent ARG Robert, Pedro W Crous, Ning Zhang, Takayuki Aoki, Kyongyong Jung, Jongsun Park, Yong-Hwan Lee, Seogchan Kang, Bongsoo Park and David M Geiser (2010) Internet-Accessible DNA sequence database for identifying Fusaria from human and animal infections. Journal of Clinical Microbiology 48: 3708-3718.
Kerry O’Donnell, Deanna A Sutton, Annette Fothergill, Dora McCarthy, Michael G Rinaldi, Mary E Brandt, Ning Zhang and David M Geiser (2008) Molecular phylogenetic diversity, multilocus haplotype nomenclature, and in vitro antifungal Rresistance within the Fusarium solani species complex. Journal of Clinical Microbiology 46: 2477-2490.
T Gräfenhan, H-J Schroers, HI Nirenberg and KA Seifert (2011) An overview of the taxonomy, phylogeny, and typification of nectriaceous fungi in Cosmospora, Acremonium, Fusarium, Stilbella, and Volutella. 68: 79-113.
Reference Strain
Fusarium matuoiMAFF 238445